論文 - 玉田 嘉紀
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Outcome of basal cell carcinoma excision with 2 mm surgical margin in Japanese patients: A retrospective study of one-step surgery.
43 216 - 226 2025年03月
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Dairy consumption has a partial inverse association with systolic blood pressure and hypertension in populations with high salt and low dairy diets: cross-sectional data analysis from the Iwaki Health Promotion Project.
Kawata D, Ueno HM, Nakano A, Tatara Y, Tamada Y, Mikami T, Murashita K, Nakaji S, Itoh K
Hypertension research : official journal of the Japanese Society of Hypertension 2025年01月
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Association of visceral fat area with early-stage locomotive syndrome across various age groups: a cross-sectional study.
Miyazaki T, Ozato N, Yamaguchi T, Sugiura Y, Kawada H, Katsuragi Y, Osaki N, Mikami T, Ito K, Murashita K, Nakaji S, Tamada Y
Scientific reports 14 ( 1 ) 25498 2024年10月
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Dairy consumption, bone turnover biomarkers, and osteo sono assessment index in Japanese adults: A cross-sectional analysis of data from the Iwaki Health Promotion Project.
Nakano A, Ueno HM, Kawata D, Tatara Y, Tamada Y, Mikami T, Murashita K, Nakaji S, Itoh K
Bone reports 21 101770 2024年06月
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Association between Gut Microbiota and Muscle Strength in Japanese General Population of the Iwaki Health Promotion Project.
Sugimura Y, Yang Y, Kanda A, Mawatari A, Tamada Y, Mikami T, Nakaji S, Ihara K
Microorganisms 12 ( 3 ) 622 - 622 2024年03月
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FLAIR Hyperintensities in the Anterior Part of the Callosal Splenium in the Elderly Population: A Large Cohort Study.
Kasai S, Watanabe K, Ide S, Ishimoto Y, Sasaki M, Umemura Y, Tatsuo S, Kakeda S, Mikami T, Tamada Y, Miki Y, Wakabayashi K, Tomiyama M, Kakeda S
Academic radiology 31 ( 7 ) 2922 - 2929 2024年02月
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Effects of rewarming therapies on outcomes in accidental hypothermia: A secondary analysis of a multicenter prospective study.
Sugiyama K, Nomura O, Irie J, Ishizawa Y, Takauji S, Hayakawa M, Tamada Y, Hanada H
The American journal of emergency medicine 79 91 - 96 2024年02月
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Strategies for promoting health in society utilizing quality-of-life check-ups: a protocol paper
Nakaji Shigeyuki, Murashita Koichi, Mikami Tatsuya, Tamada Yoshinori, Uemura Nozomi
Preventive Medicine Research 1 ( 4 ) 43 - 54 2024年01月
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Idiopathic pulmonary fibrosis-specific Bayesian network integrating extracellular vesicle proteome and clinical information.
Tomoto M, Mineharu Y, Sato N, Tamada Y, Nogami-Itoh M, Kuroda M, Adachi J, Takeda Y, Mizuguchi K, Kumanogoh A, Natsume-Kitatani Y, Okuno Y
Scientific reports 14 ( 1 ) 1315 2024年01月
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Choroid plexus enlargement in mild cognitive impairment on MRI: a large cohort study.
Umemura Y, Watanabe K, Kasai S, Ide S, Ishimoto Y, Sasaki M, Nagaya H, Tatsuo S, Mikami T, Tamada Y, Tomiyama M, Kakeda S
European radiology 34 ( 8 ) 5297 - 5304 2024年01月
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A Study of the Relationship Between Driving and Health Based on Large-Scale Data Analysis Using PLSA and t-SNE
Mera, M., Michida, N., Honda, M., Sakamoto, K., Tamada, Y., Mikami, T., Nakaji, S.
IEEE Access 12 2024年
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Association between hemoglobin levels and cerebral white matter volume in a general older Japanese population: the Iki-Iki study.
Yamamoto H, Watanabe K, Momma S, Tatsuo S, Matsuzaka M, Tamada Y, Mikami T, Nakaji S, Kakeda S
Neuroradiology 2024年
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Association between NF-E2-related factor 2 polymorphism and age-related hearing loss in the general Japanese population from the Iwaki health promotion project.
Kasai T, Sasaki A, Kasai S, Miura S, Goto S, Yotsuyanagi R, Mikami T, Tamada Y, Itoh K, Matsubara A
Acta oto-laryngologica 145 ( 1 ) 36 - 42 2024年
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Subgrouping Causal Networks of Disease Onset in Large-scale Health and Medical Data using Supercomputer Fugaku
IEEE BIBM the International Workshop on Foundations of Network Analysis 2024年
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Altered structural hippocampal intra-networks in a general elderly Japanese population with mild cognitive impairment.
Kasai S, Watanabe K, Umemura Y, Ishimoto Y, Sasaki M, Nagaya H, Tatsuo S, Mikami T, Tamada Y, Ide S, Tomiyama M, Matsuzaka M, Kakeda S
Scientific reports 13 ( 1 ) 13330 2023年08月
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Individual health-disease phase diagrams for disease prevention based on machine learning.
Nakamura K, Uchino E, Sato N, Araki A, Terayama K, Kojima R, Murashita K, Itoh K, Mikami T, Tamada Y, Okuno Y
Journal of biomedical informatics 144 104448 - 104448 2023年08月
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Inhibition of the bone morphogenetic protein pathway suppresses tumor growth through downregulation of epidermal growth factor receptor in MEK/ERK-dependent colorectal cancer.
Shimizu S, Kondo J, Onuma K, Coppo R, Ota K, Kamada M, Harada Y, Tanaka Y, Nakazawa MA, Tamada Y, Okuno Y, Kawada K, Obama K, Coffey RJ, Fujiwara Y, Inoue M
Cancer science 114 ( 9 ) 3636 - 3648 2023年06月
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Definition of a Dietary Pattern Expressing the Intake of Vegetables and Fruits and Its Association with Intestinal Microbiota.
Yamauchi T, Koyama N, Hirai A, Suganuma H, Suzuki S, Murashita K, Mikami T, Tamada Y, Sato N, Imoto S, Itoh K, Nakaji S
Nutrients 15 ( 9 ) 2023年04月
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Multiomics and artificial intelligence enabled peripheral blood-based prediction of amnestic mild cognitive impairment.
Tatara Y, Yamazaki H, Katsuoka F, Chiba M, Saigusa D, Kasai S, Nakamura T, Inoue J, Aoki Y, Shoji M, Motoike IN, Tamada Y, Hashizume K, Shoji M, Kinoshita K, Murashita K, Nakaji S, Yamamoto M, Itoh K
Current research in translational medicine 71 ( 1 ) 103367 - 103367 2023年01月
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Effect of gut microbial composition and diversity on major inhaled allergen sensitization and onset of allergic rhinitis.
Yamaguchi T, Nomura A, Matsubara A, Hisada T, Tamada Y, Mikami T, Ishida M
Allergology international 72 ( 1 ) 135 - 142 2023年
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富岳を用いた遺伝子ネットワーク解析によるAIターゲット予測
玉田 嘉紀
日本薬理学会年会要旨集 97 ( 0 ) 1-B-S04-1 2023年
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Association of Gut Microbial Genera with Heart Rate Variability in the General Japanese Population: The Iwaki Cross-Sectional Research Study.
Tsubokawa M, Nishimura M, Mikami T, Ishida M, Hisada T, Tamada Y
Metabolites 12 ( 8 ) 2022年08月
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Correlation between Glycation-Related Biomarkers and Quality of Life in the General Japanese Population: The Iwaki Cross-Sectional Research Study.
Tsubokawa M, Nishimura M, Murashita K, Iwane T, Tamada Y
International journal of environmental research and public health 19 ( 15 ) 2022年07月
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Factors Associated with Reduced Heart Rate Variability in the General Japanese Population: The Iwaki Cross-Sectional Research Study.
Tsubokawa M, Nishimura M, Tamada Y, Nakaji S
Healthcare (Basel, Switzerland) 10 ( 5 ) 2022年04月
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CBNplot: Bayesian network plots for enrichment analysis.
Sato N, Tamada Y, Yu G, Okuno Y
Bioinformatics (Oxford, England) 38 ( 10 ) 2959 - 2960 2022年03月
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Two Blautia Species Associated with Visceral Fat Accumulation: A One-Year Longitudinal Study.
Ozato N, Yamaguchi T, Mori K, Katashima M, Kumagai M, Murashita K, Katsuragi Y, Tamada Y, Kakuta M, Imoto S, Ihara K, Nakaji S
Biology 11 ( 2 ) 2022年02月
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Novel cancer subtyping method based on patient-specific gene regulatory network.
Nakazawa MA, Tamada Y, Tanaka Y, Ikeguchi M, Higashihara K, Okuno Y
Scientific reports 11 ( 1 ) 23653 - 23653 2021年12月
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Dynamic changes in gene-to-gene regulatory networks in response to SARS-CoV-2 infection.
Tanaka Y, Higashihara K, Nakazawa MA, Yamashita F, Tamada Y, Okuno Y
Scientific reports 11 ( 1 ) 11241 - 11241 2021年05月
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Classification of glomerular pathological findings using deep learning and nephrologist-AI collective intelligence approach.
Uchino E, Suzuki K, Sato N, Kojima R, Tamada Y, Hiragi S, Yokoi H, Yugami N, Minamiguchi S, Haga H, Yanagita M, Okuno Y
International journal of medical informatics 141 104231 - 104231 2020年09月
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Variant analysis of prostate cancer in Japanese patients and a new attempt to predict related biological pathways.
Kasajima R, Yamaguchi R, Shimizu E, Tamada Y, Niida A, Tremmel G, Kishida T, Aoki I, Imoto S, Miyano S, Uemura H, Miyagi Y
Oncology reports 43 ( 3 ) 943 - 952 2020年03月
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System-Based Differential Gene Network Analysis for Characterizing a Sample-Specific Subnetwork.
Tanaka Y, Tamada Y, Ikeguchi M, Yamashita F, Okuno Y
Biomolecules 10 ( 2 ) 2020年02月
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Memory efficient parallel algorithm for optimal DAG structure search using direct communication
Yoshinori Tamada
Journal of Parallel and Distributed Computing 119 27 - 35 2018年
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Oncogenic roles of TOPK and MELK, and effective growth suppression by small molecular inhibitors in kidney cancer cells.
Kato T, Inoue H, Imoto S, Tamada Y, Miyamoto T, Matsuo Y, Nakamura Y, Park JH
Oncotarget 7 ( 14 ) 17652 - 64 2016年04月
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The hnRNP-Htt axis regulates necrotic cell death induced by transcriptional repression through impaired RNA splicing
Y. Mao, T. Tamura, Y. Yuki, D. Abe, Y. Tamada, S. Imoto, H. Tanaka, H. Homma, K. Tagawa, S. Miyano, H. Okazawa
CELL DEATH & DISEASE 7 e2207 2016年04月
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Efficient parallel algorithm for optimal DAG structure search on parallel computer with torus network
Honda, H., Tamada, Y., Suda, R.
Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) 10048 LNCS 2016年
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Elevated β-catenin pathway as a novel target for patients with resistance to EGF receptor targeting drugs.
Nakata A, Yoshida R, Yamaguchi R, Yamauchi M, Tamada Y, Fujita A, Shimamura T, Imoto S, Higuchi T, Nomura M, Kimura T, Nokihara H, Higashiyama M, Kondoh K, Nishihara H, Tojo A, Yano S, Miyano S, Gotoh N
Scientific reports 5 ( 1 ) 13076 2015年08月
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Lung adenocarcinoma subtypes definable by lung development-related miRNA expression profiles in association with clinicopathologic features.
Arima C, Kajino T, Tamada Y, Imoto S, Shimada Y, Nakatochi M, Suzuki M, Isomura H, Yatabe Y, Yamaguchi T, Yanagisawa K, Miyano S, Takahashi T
Carcinogenesis 35 ( 10 ) 2224 - 2231 2014年06月
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Vasohibin-1 is identified as a master-regulator of endothelial cell apoptosis using gene network analysis.
Affara M, Sanders D, Araki H, Tamada Y, Dunmore BJ, Humphreys S, Imoto S, Savoie C, Miyano S, Kuhara S, Jeffries D, Print C, Charnock-Jones DS
BMC genomics 14 ( 1 ) 23 - 23 2013年
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Cell cycle gene networks are associated with melanoma prognosis.
Wang L, Hurley DG, Watkins W, Araki H, Tamada Y, Muthukaruppan A, Ranjard L, Derkac E, Imoto S, Miyano S, Crampin EJ, Print CG
PloS one 7 ( 4 ) e34247 2012年04月
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Computational gene network analysis reveals TNF-induced angiogenesis.
Ogami K, Yamaguchi R, Imoto S, Tamada Y, Araki H, Print C, Miyano S
BMC systems biology 6 ( Suppl 2 ) S12 2012年
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Gene network inference and visualization tools for biologists: application to new human transcriptome datasets.
Hurley D, Araki H, Tamada Y, Dunmore B, Sanders D, Humphreys S, Affara M, Imoto S, Yasuda K, Tomiyasu Y, Tashiro K, Savoie C, Cho V, Smith S, Kuhara S, Miyano S, Charnock-Jones DS, Crampin EJ, Print CG
Nucleic acids research 40 ( 6 ) 2377 - 2398 2011年11月
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Estimating genome-wide gene networks using nonparametric Bayesian network models on massively parallel computers.
Tamada Y, Imoto S, Araki H, Nagasaki M, Print C, Charnock-Jones DS, Miyano S
IEEE/ACM transactions on computational biology and bioinformatics 8 ( 3 ) 683 - 697 2011年05月
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Parallel algorithm for learning optimal bayesian network structure
Tamada, Y., Imoto, S., Miyano, S.
Journal of Machine Learning Research 12 2011年
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SiGN-SSM: open source parallel software for estimating gene networks with state space models.
Tamada Y, Yamaguchi R, Imoto S, Hirose O, Yoshida R, Nagasaki M, Miyano S
Bioinformatics (Oxford, England) 27 ( 8 ) 1172 - 3 2011年
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Searching optimal Bayesian network structure on constraint search space: Super-structure approach
Imoto, S., Kojima, K., Perrier, E., Tamada, Y., Miyano, S.
Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) 6797 LNAI 2011年
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Collocation-based sparse estimation for constructing dynamic gene networks.
Shimamura T, Imoto S, Nagasaki M, Yamauchi M, Yamaguchi R, Fujita A, Tamada Y, Gotoh N, Miyano S
Genome informatics. International Conference on Genome Informatics 24 164 - 78 2010年
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Analysis of PPARalpha-dependent and PPARalpha-independent transcript regulation following fenofibrate treatment of human endothelial cells.
Araki H, Tamada Y, Imoto S, Dunmore B, Sanders D, Humphrey S, Nagasaki M, Doi A, Nakanishi Y, Yasuda K, Tomiyasu Y, Tashiro K, Print C, Charnock-Jones DS, Kuhara S, Miyano S
Angiogenesis 12 ( 3 ) 221 - 229 2009年04月
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Gene networks viewed through two models
Miyano, S., Yamaguchi, R., Tamada, Y., Nagasaki, M., Imoto, S.
Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) 5462 LNBI 2009年
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Unraveling dynamic activities of autocrine pathways that control drug-response transcriptome networks.
Yoshinori Tamada, Hiromitsu Araki, Seiya Imoto, Masao Nagasaki, Atsushi Doi, Yukiko Nakanishi, Yuki Tomiyasu, Kaori Yasuda, Ben Dunmore, Deborah Sanders, Sally Humphreys, Cristin Print, D Stephen Charnock-Jones, Kousuke Tashiro, Satoru Kuhara, Satoru Miyano
Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing 251 - 63 2009年
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A novel strategy to search conserved transcription factor binding sites among coexpressing genes in human.
Hatanaka Y, Nagasaki M, Yamaguchi R, Obayashi T, Numata K, Fujita A, Shimamura T, Tamada Y, Imoto S, Kinoshita K, Nakai K, Miyano S
Genome informatics. International Conference on Genome Informatics 20 212 - 21 2008年
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Analysis of gene networks for drug target discovery and validation.
Imoto S, Tamada Y, Savoie CJ, Miyano S
Methods in molecular biology (Clifton, N.J.) 360 33 - 56 2007年
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Understanding endothelial cell apoptosis: what can the transcriptome, glycome and proteome reveal?
Affara M, Dunmore B, Savoie C, Imoto S, Tamada Y, Araki H, Charnock-Jones DS, Miyano S, Print C
Philosophical transactions of the Royal Society of London. Series B, Biological sciences 362 ( 1484 ) 1469 - 87 2007年
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グラフマイニングとその統計的モデリングへの応用
鷲尾 隆, 樋口 知之, 井元 清哉, 玉田 嘉紀, 佐藤 健, 元田 浩
統計数理 = Proceedings of the Institute of Statistical Mathematics 54 ( 2 ) 315 - 331 2006年12月
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Computational strategy for discovering druggable gene networks from genome-wide RNA expression profiles.
Seiya Imoto, Yoshinori Tamada, Hiromitsu Araki, Kaori Yasuda, Cristin G Print, Stephen D Charnock-Jones, Deborah Sanders, Christopher J Savoie, Kousuke Tashiro, Satoru Kuhara, Satoru Miyano
Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing 559 - 71 2006年
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From closed tree mining towards closed DAG mining
Alexandre Termier, Yoshinori Tamada, Seiya Imoto, Takashi Washio, Tomoyuki Higuchi
Proc. International Workshop on Data Mining and Statstical Science 1 - 7 2006年
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異種ゲノムデータの統合による遺伝子ネットワーク推定手法 (特集 予測と発見)
玉田 嘉紀, 井元 清哉, 宮野 悟
統計数理 54 ( 2 ) 333 - 356 2006年
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Genomic data assimilation for estimating hybrid functional Petri net from time-course gene expression data.
Nagasaki M, Yamaguchi R, Yoshida R, Imoto S, Doi A, Tamada Y, Matsuno H, Miyano S, Higuchi T
Genome informatics. International Conference on Genome Informatics 17 ( 1 ) 46 - 61 2006年
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Estimating gene networks from expression data and binding location data via Boolean networks
O Hirose, N Nariai, Y Tamada, H Bannai, S Imoto, S Miyano
COMPUTATIONAL SCIENCE AND ITS APPLICATIONS - ICCSA 2005, PT 3 3482 349 - 356 2005年
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Utilizing evolutionary information and gene expression data for estimating gene networks with bayesian network models.
Tamada Y, Bannai H, Imoto S, Katayama T, Kanehisa M, Miyano S
Journal of bioinformatics and computational biology 3 ( 6 ) 1295 - 1313 2005年
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Identifying drug active pathways from gene networks estimated by gene expression data.
Tamada Y, Imoto S, Tashiro K, Kuhara S, Miyano S
Genome informatics. International Conference on Genome Informatics 16 ( 1 ) 182 - 91 2005年
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Estimating gene regulatory networks and protein-protein interactions of Saccharomyces cerevisiae from multiple genome-wide data.
Nariai N, Tamada Y, Imoto S, Miyano S
Bioinformatics (Oxford, England) 21 ( SUPPL. 2 ) ii206 - 12 2005年
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Estimating gene networks from gene expression data by combining Bayesian network model with promoter element detection.
Tamada Y, Kim S, Bannai H, Imoto S, Tashiro K, Kuhara S, Miyano S
Bioinformatics (Oxford, England) 19 ( SUPPL. 2 ) ii227 - 36 2003年
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Intrasplicing--analysis of long intron sequences.
Ott, S., Tamada, Y., Bannai, H., Nakai, K., Miyano, S.
Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing 2003年
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Fast algorithm for extracting multiple unordered short motifs using bit operations
Osamu Maruyama, Hideo Bannai, Yoshinori Tamada, Satoru Kuhara, Satoru Miyano
Information Sciences 146 ( 1-4 ) 115 - 126 2002年10月
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Extensive feature detection of N-terminal protein sorting signals.
Bannai H, Tamada Y, Maruyama O, Nakai K, Miyano S
Bioinformatics (Oxford, England) 18 ( 2 ) 298 - 305 2002年02月
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Fast algorithm for extracting multiple unordered short motifs using bit operations
O Maruyama, H Bannai, Y Tamada, S Kuhara, S Miyano
PROCEEDINGS OF THE 6TH JOINT CONFERENCE ON INFORMATION SCIENCES 1180 - 1185 2002年
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Foundations of designing computational knowledge discovery processes
Tamada, Y., Bannai, H., Maruyama, O., Miyano, S.
Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) 2281 2002年
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Concepts for Accelerating the Computational Knowledge Discovery Process
Hideo Bannai, Yoshinori Tamada, Osamu Maruyama, Satoru Miyano
Linkoping Electronic Articles in Computer and Information Science 6 2001年
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HypothesisCreator: Concepts for Accelerating the Computational Knowledge Discovery Process.
Hideo Bannai, Yoshinori Tamada, Osamu Maruyama, Satoru Miyano
Electron. Trans. Artif. Intell. 5 ( B ) 73 - 83 2001年
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VML: A View Modeling Language for computational knowledge discovery
Bannai, H., Tamada, Y., Maruyama, O., Miyano, S.
Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) 2226 2001年
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Views: Fundamental Building Blocks in the Process of Knowledge Discovery
Hideo Bannai, Yoshinori Tamada, Osamu Maruyama, Satoru Miyano
Proceedings of the 14th International FLAIRS Conference 233 - 238 2001年