Papers - KASHIWAGI AKIKO
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Adaptation of a cyanobacterium to a biochemically rich environment in experimental evolution as an initial step toward a chloroplast-like state
Hosoda K, Habuchi M, Suzuki S, Miyazaki M, Takikawa G, Sakurai T, Kashiwagi A, Sueyoshi M, Matsumoto Y, Kiuchi A, Mori K, Yomo T.
PLoS ONE 9 ( 5 ) e98337 2014.5
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Quantitative comparison of the RNA bacteriophage Qβ life cycle in rich and minimal media
Tomonori Inomata, Hitomi Kimura, Haruki Hayasaka, Akinori Shiozaki, Yasuhiro Fujita, Akiko Kashiwagi
Archives of Virology 2012.7
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Ongoing phenotypic and genomic changes in experimental coevolution of RNA bacteriophage Qβ and Escherichia coli
Akiko Kashiwagi, Tetsuya Yomo
PLoS Genetics 7 ( 8 ) 2011.8
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Adaptation by stochastic switching of a monostable genetic circuit in Escherichia coli
Saburo Tsuru, Nao Yasuda, Yoshie Murakami, Junya Ushioda, Kotaro Mori, Akiko Kashiwagi, Shingo Suzuki, Bei-Wen Ying, Tetsuya Yomo
Molecular Systems Biology 7 2011.3
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Cooperative adaptation to establishment of a synthetic bacterial mutualism
Kazufumi Hosoda, Shingo Suzuki, Yoshinori Yamauchi, Yasunori Shiroguchi, Akiko Kashiwagi, Naoaki Ono, Kotaro Mori, Tetsuya Yomo
PLoS ONE 6 ( 2 ) 2011.2
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Transition from positive to neutral in mutation fixation along with continuing rising fitness in thermal adaptive evolution
Toshihiko Kishimoto, Leo Iijima, Makoto Tatsumi, Naoaki Ono, Ayana Oyake, Tomomi Hashimoto, Moe Matsuo, Masato Okubo, Shingo Suzuki, Kotaro Mori, Akiko Kashiwagi, Chikara Furusawa, Bei-Wen Ying, Tetsuya Yomo
PLoS Genetics 6 ( 10 ) 2010.10
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Still alive
88 ( 4 ) 184 - 185 2010.4
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弘前大学の生物工学会会員です(北日本支部,Branch Spirit)
柏木 明子, 園木 和典
生物工学会誌 : seibutsu-kogaku kaishi 88 ( 6 ) 2010
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Noisy cell growth rate leads to fluctuating protein concentration in bacteria.
Tsuru S, Ichinose J, Kashiwagi A, Ying BW, Kaneko K, Yomo T
Physical biology 6 ( 3 ) 036015 2009.6
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Evolution of carrying capacity in evolution experiments focusing on a single locus on the Escherichia coli chromosome
Kotaro Mori, Akiko Kashiwagi, Itaru Urabe and Tetsuya Yomo
BioSystems 95 ( 2 ) 114 - 119 2009.2
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Construction of Escherichia coli gene expression level perturbation collection.
Kashiwagi A, Sakurai T, Tsuru S, Ying BW, Mori K, Yomo T
Metabolic engineering 11 ( 1 ) 56 - 63 2009.1
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2P-143 栄養枯渇に対する適応応答における遺伝子発現の確率性(細胞生物的課題(接着,運動,骨格,伝達,膜),第47回日本生物物理学会年会)
Tsuru Saburo, Ying Bei-Wen, Mori Kotaro, Ushioda Junya, Kashiwagi Akiko, Yomo Tetsuya
生物物理 49 ( 0 ) 2009
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1P-241 2種の栄養要求性大腸菌からなる人工相利共生系において観察される協力的な適応的表現型可塑性(生態/環境,第47回日本生物物理学会年会)
Hosoda Kazufumi, Mori Kotaro, Kashiwagi Akiko, Suzuki Shingo, Yomo Tetsuya
生物物理 49 ( 0 ) 2009
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An improved physico-chemical model of hybridization on high-density oligonucleotide microarrays.
Ono N, Suzuki S, Furusawa C, Agata T, Kashiwagi A, Shimizu H, Yomo T
Bioinformatics (Oxford, England) 24 ( 10 ) 1278 - 85 2008.5
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Phenotypic plasticity of Escherichia coli at initial stage of symbiosis with Dictyostelium discoideum.
Yamada A, Matsuyama S, Todoriki M, Kashiwagi A, Urabe I, Yomo T
Bio Systems 92 ( 1 ) 1 - 9 2008.4
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An improved physico-chemical model of hybridization on high-density oligonucleotide microarrays
Naoki Ono, Shingo Suzuki, Chikara Furusawa, Tomoharu Agata, Akiko Kashiwagi, Hiroshi Shimizu and Tetsuya Yomo
Bioinformatics 24 ( 10 ) 1278 - 1285 2008.3
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3P-284 大腸菌と細胞性粘菌からなる共生コロニー目形成過程における大腸菌の詳細な遺伝子発現解析(生命の起源・進化,第46回日本生物物理学会年会)
Kihara Kumiko, Mori Kotaro, Ono Naoki, Suzuki Shingo, Kashiwagi Akiko, Furusawa Chikara, Yomo Tetsuya
生物物理 48 ( 0 ) 2008
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Analysis of fluctuation in protein abundance without promoter regulation based on Escherichia coli continuous culture.
Yamada T, Furusawa C, Nagahisa K, Kashiwagi A, Yomo T, Shimizu H
Bio Systems 90 ( 3 ) 614 - 22 2007.11
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Experimental optimization of probe length to increase the sequence specificity of high-density oligonucleotide microarrays
Shingo Suzuki, Naoki Ono, Chikara Furusawa, Akiko Kashiwagi and Tetsuya Yomo
BMC Genomics 8 373 2007.10
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Insight into the sequence specificity of a probe on an Affymetrix GeneChip by titration experiments using only one oligonucleotide
Shingo Suzuki, Chikara Furusawa, Naoki Ono, Akiko Kashiwagi, Itaru Urabe and Tetsuya Yomo
BIOPHYSICS 3 47 - 56 2007.9