Papers - SONOKI Tomonori
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Selective vanillate production from sugar cane bagasse-derived aromatic compounds using an engineered Pseudomonas sp. NGC7-based strain.
Alam MD J, Kodama N, Ikeda K, Muraki K, Higuchi Y, Fujita M, Kamimura N, Masai E, Kurihara H, Sonoki T
Journal of Bioscience and Bioengineering 141 ( 2 ) 125 - 134 2026.2
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Calcium hydroxide and magnesium oxide are beneficial bases for selective recovery of ferulic acid and vanillic acid production from wheat bran
Kurnia I, Yoshida A, Higuchi Y, Isobe K, Sonoki T
Waste and Biomass Valorization 2026.2
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Catabolic System of Syringic Acid, a Key Intermediate of Lignin-Derived Aromatic Compounds, via a Novel Linear Pathway in Pseudomonas sp. NGC7.
Ookawa Z, Higuchi Y, Fujita M, Sonoki T, Kamimura N, Masai E
Journal of Agriculture & Food Chemistry 73 ( 30 ) 18899 - 18913 2025.7
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Stabilizing organic matter and reducing methane emissions in composting with biochar to strengthen the role of compost in soil health.
Jindo K, Sonoki T, Sánchez-Monedero MA
Soil & Environmental Health 3 100164 2025.6
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Engineering a vanillate-producing strain of Pseudomonas sp. NGC7 corresponding to aromatic compounds derived from the continuous catalytic alkaline oxidation of sulfite lignin
Mami Kamada, Chieko Yasuta, Yudai Higuchi, Akihiro Yoshida, Irwan Kurnia, Chiho Sakamoto, Aya Takeuchi, Yuta Osaka, Kanami Muraki, Naofumi Kamimura, Eiji Masai, Tomonori Sonoki,
Microbial Cell Factories 23 313 2024.11
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Direct catalytic oxidation of rice husk lignin with hydroxide nanorod-modified copper foam and muconate production by engineered Pseudomonas sp. NGC7
Akihiro Yoshida, Irwan Kurnia, Yudai Higuchi, Yuta Osaka, Chieko Yasuta, Chiho Sakamoto, Mina Tamura, Tsubasa Takamatsu, Naofumi Kamimura, Eiji Masai, Tomonori Sonoki.
Journal of Bioscience and Bioengineering 138 ( 5 ) 431 2024.8
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Direct extraction of biphasic organosolv lignin for producing aromatic aldehydes via alkaline oxidation
Hiroya Ishimaru H, Takuya Yoshikawa, Yuta Nakasaka, Yudai Higuchi, Akihiro Yoshida, Tomonori Sonoki, Takao Masuda.
Journal of the Taiwan Institute of Chemical Engineers 158 105009 2024.5
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Successful selective production of vanillic acid from depolymerized sulfite lignin and its application to poly(ethylene vanillate) synthesis
Yudai Higuchi, Hiroya Ishimaru, Takuya Yoshikawa, Takao Masuda, Chiho Sakamoto, Naofumi Kamimura, Eiji Masai, Daisuke Takeuchi, Tomonori Sonoki
Bioresource Technology 385 129450 2023.7
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The catabolic system of acetovanillone and acetosyringone in Sphingobium sp. strain SYK-6 useful for upgrading aromatic compounds obtained through chemical lignin depolymerization.
Yudai Higuchi, Naofumi Kamimura, Hiroki Takenami, Yusei Kikuiri, Chieko Yasuta, Kenta Tanatani, Toru Shobuda, Yuichiro Otsuka, Masaya Nakamura, Tomonori Sonoki, Eiji Masai
Applied and Environmental Microbiology 359 e00724-22 2022.8
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Pseudomonas sp. NGC7 as a microbial chassis for glucose-free muconate production from a variety of lignin-derived aromatics and its application to the production from sugar cane bagasse alkaline extract
Miho Akutsu, Nanase Abe, Chiho Sakamoto, Yuki Kurimoto, Haruka Sugita, Makoto Tanaka, Yudai Higuchi, Kimitoshi Sakamoto, Naofumi Kamimura, Hiroyuki Kurihara, Eiji Masai, Tomonori Sonoki
Bioresource Technology 359 127479 2022.6
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Properties of Activated Carbon from Apple Branches by Different Activation Time
64 ( 1 ) 75 - 82 2022.3
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Engineered Pseudomonas putida Strains Producing cis,cis-Muconic Acid from Lignin-Related Phenols.
Akihiro Kikuchi, Haruka Sugita, Minami Hatamura, Miho Akutsu, Tomonori Sonoki
The 9th International Conference on Environmental Engineering, Science and Management 2020.10
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Isolation of a novel platform bacterium for lignin valorization and its application to glucose-free cis,cis-muconate production
Shinoda E, Takahashi K, Abe N, Kamimura N, Sonoki T, Masai E
Journal of Industrial Microbiology and Biotechnology 46 ( 8 ) 1071 - 1080 2019.7
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The efficiency of a low dose of biochar in enhancing the aromaticity of humic-like substance extracted from poultry manure compost.
Jindo K, Sanchez-Monedero MA, Matsumoto K, Sonoki T
Agronomy 9 ( 5 ) 248 2019.5
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Comparative assessment of biochar stability using multiple indicators
Jindo K, Sonoki T
Agronomy 9 ( 5 ) 254 2019.5
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<b>Effects of molding pressures on physical and chemical changes in </b><b>Bio-coke produced from wood biomass </b>
KIMURA Takashi, HIROSE Takashi, YE Xujun, SONOKI Tomonori, ODA Akihiro, ZHANG Shuhuai
Journal of the Society of Materials Engineering for Resources of Japan 29 ( 1_2 ) 7 - 11 2018.3
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Glucose-Free cis,cis-Muconic Acid Production via New Metabolic Designs Corresponding to the Heterogeneity of Lignin
Tomonori Sonoki, Kenji Takahashi, Haruka Sugita, Minami Hatamura, Yuta Azuma, Takumi Sato, Sachio Suzuki, Naofumi Kamimura, Eiji Masai
ACS Sustainable Chemistry and Engineering 6 ( 1 ) 1256 - 1264 2018.1
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Heterologous expression of Trametes versicolor laccase in Saccharomyces cerevisiae
Yosuke Iimura, Tomonori Sonoki, Hiroshi Habe
PROTEIN EXPRESSION AND PURIFICATION 141 39 - 43 2018.1
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Expression of a fungal laccase fused with a bacterial cellulose-binding module improves the enzymatic saccharification efficiency of lignocellulose biomass in transgenic Arabidopsis thaliana
Ryota Iiyoshi, Taichi Oguchi, Toru Furukawa, Yosuke Iimura, Yukihiro Ito, Tomonori Sonoki
TRANSGENIC RESEARCH 26 ( 6 ) 753 - 761 2017.12
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Accumulation of proanthocyanidins and/or lignin deposition in buff-pigmented soybean seed coats may lead to frequent defective cracking
Mineo Senda, Naoya Yamaguchi, Miho Hiraoka, So Kawada, Ryota Iiyoshi, Kazuki Yamashita, Tomonori Sonoki, Hayato Maeda, Michio Kawasaki
PLANTA 245 ( 3 ) 659 - 670 2017.3
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Stable chiral carboxymuconolactone production from a lignin-related aromatic compound, protocatechuic acid.
Kondo S, Sugimura K, Okamura Y, Sato-Izawa K, Otsuka Y, Nakamura M, Kajita S, Masai E, Sonoki T, Katayama Y
Fermentation Technology 5 ( 3 ) 135 - 138 2016.11
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The enzymatic activities of cell free extract from acidophilic Burkholderia oxyphila OX-01 catalyzes anaerobic oxidation at the C-4 position of (+)-catechin and (-)-epicatechin into (+)-taxifolin.
2016.8
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Difference of saccharification yields among organs and growth stages in rice.
Abe T, Iiyoshi R, Ito K, Takahashi Y, Sato K, Matsuzaka A, Sonoki T, Ito Y.
Plant Biotechnology 33 105 - 110 2016.7
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Engineered microbial production of 2-pyrone-4,6-dicarboxylic acid from lignin residues for use as an industrial platform chemical.
Qian Y, Otsuka Y, Sonoki T, Mukhopadhyay B, Nakamura M, Masai E, Katayama Y, Okamura-Abe Y, Jellison J, Goodell B.
Bioresources 11 ( 3 ) 6097 - 6109 2016.5
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Beta-ketoadipic acid and muconolactone production from a lignin-related aromatic compound through the protocatechuate 3,4-metabolic pathway.
Okamura-Abe Y, Abe T, Nishimura K, Kawana Y, Sato-Izawa K, Otsuka Y, Nakamura M, Kajita S, Masai E, Sonoki T, Katayama Y.
Journal of Bioscience and Bioengineering 121 ( 6 ) 652 - 658 2016.5
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Influence of biochar addition on the humic substances of composting manures.
Jindo K, Sonoki T, Matsumoto K, Canellas L, Roig A, Sanchez-Monedero MA.
Waste Management 49 545 - 552 2016.1
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非可食バイオマスから有用基幹化合物を生産する微生物触媒の開発 (特集 グリーンイノベーション実用化への期待)
今 仁志, 園木 和典
ケミカルエンジニヤリング = Chemical engineering 60 ( 10 ) 767 - 771 2015.10
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A novel approach to recycle bacterial culture waste for fermentation reuse via a microbial fuel cell-membrane bioreactor system.
Le J, Zhu Y, Zhuang L, Otsuka Y, Nakamura M, Goodell B, Sonoki T, He J.
Bioprocess and Biosystems Engineering 2015.6
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Water-insoluble material from apple pomace makes changes in intracellular NAD(+)/NADH ratio and pyrophosphate content and stimulates fermentative production of hydrogen
Osamu Sato, Yuma Suzuki, Yuki Sato, Shinsuke Sasaki, Tomonori Sonoki
JOURNAL OF BIOSCIENCE AND BIOENGINEERING 119 ( 5 ) 543 - 547 2015.5
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Enhancement of protocatechuate decarboxylase activity for the effective production of muconate from lignin-related aromatic compounds.
Sonoki T, Morooka M, Sakamoto K, Otsuka Y, Nakamura M, Jellison J, Goodell B
Journal of Biotechnology 192 71 - 77 2014.10
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Methodological interference of biochar in the determination of extracellular enzyme activities in composting samples.
Jindo K, Matsumoto K, Garzcia C, Sonoki T, Sanchez-Monedero MA
Solid Earth 5 1 - 7 2014.7
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Enhanced production of reducing sugars from transgenic rice expressing exo-glucanase under the control of a senescence-inducible promoter.
Furukawa K, Ichikawa S, Nigorikawa M, Sonoki T, Ito Y
Transgenic Research 23 531 - 537 2014.5
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Physical and chemical characterization of biochars derived from different agricultural residues
K. Jindo, H. Mizumoto, Y. Sawada, M. A. Sanchez-Monedero, T. Sonoki
BIOGEOSCIENCES 11 ( 23 ) 6613 - 6621 2014
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Application of fungal laccase fused with cellulose binding domain to develop low-lignin rice plants.
Furukawa T, Sawaguchi C, Watanabe A, Takahashi M, Nigorikawa M, Furukawa K, Iimura Y, Kajita S, Oguchi T, Ito Y, Sonoki T
Journal of Bioscience and Bioengineering 116 ( 5 ) 616 - 619 2013.10
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Glycosylation of tyrosinase is a determinant of melanin production in cultured melanoma cells
Mari Mikami, Tomonori Sonoki, Minase Ito, Yoko Funasaka, Tamio Suzuki, Yohtaro Katagata
MOLECULAR MEDICINE REPORTS 8 ( 3 ) 818 - 822 2013.9
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Influence of biochar addition on methane metabolism during thermophilic phase of composting
Tomonori Sonoki, Toru Furukawa, Keiji Jindo, Koki Suto, Masakazu Aoyama, Miguel A. Sanchez-Monedero
JOURNAL OF BASIC MICROBIOLOGY 53 ( 7 ) 617 - 621 2013.7
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青森県土壌より単離したClostridium beijerinckii HU-1によるりんご搾り粕を原料とした水素発酵 (特集 微生物によるバイオ水素製造技術の現状)
鈴木 由麻, 園木 和典
水素エネルギーシステム = Journal of the Hydrogen Energy Systems Society of Japan 38 ( 1 ) 9 - 13 2013
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Cost-effectiveness Analysis Method for Wood Biomass Power Generation using Logging Residues
Fukuda K, Sonoki T, Okabe T.
Transactions in the Materials Research Society of Japan 37 ( 4 ) 547 - 550 2012.12
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Enhanced saccharification of rice straw by overexpression of rice exo-glucanase.
Nigorikawa M, Watanabe A, Furukawa K, Sonoki T, Ito Y.
Rice 5 14 2012.7
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Biochar influences the microbial community structure during manure composting with agricultural wastes.
Jindo K, Sanchez-Monedero MA, Hernandez T, Garcia C, Furukawa T, Matsumoto K, Sonoki T, Bastida F.
Science of the Total Environment. 416 476 - 481 2012.4
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Chemical and biochemical characterisation of biochar-blended composts prepared from poultry manure
Keiji Jindo, Koki Suto, Kazuhiro Matsumoto, Carlos Garcia, Tomonori Sonoki, Miguel A. Sanchez-Monedero
BIORESOURCE TECHNOLOGY 110 396 - 404 2012.4
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Characterization of biochar-blended composting for carbon offset.
Sonoki T, Suto K, Mizumoto H, Furukawa T, Kimura K, Fang J, Jindo K, Sanchez-Monedero MA.
Transactions in the Materials Research Society of Japan 36 ( 4 ) 581 - 584 2011.12
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Effect of charcoal-blended compost on the growth of welsh onion (Allium fistulosum L.).
Matsumoto K, Kogo T, Sudo H, Jindo K, Sonoki T, Sanchez-Monedero MA.
Wood Carbonization Research 8 ( 1 ) 18 - 23 2011.10
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Effective removal of bisphenol A from contaminated areas by recombinant plant producing lignin peroxidase.
Sonoki T, Kajita S, Uesugi M, Katayama Y, Iimura Y.
Journal of Petroleum and Environmental Biotechnology 2 ( 1 ) 105 - 107 2011.8
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Effects of biochar- and pyroligneous acid-blended compost made by regional waste biomass of Aomori on the growth of radish (Raphanus sativus var. sativus).
Matsumoto K, Jindo K, Suto K, Sudo H, Sasaki Y, Sonoki T.
Wood Carbonization Research 7 ( 2 ) 63 - 67 2011.4
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Characterization of biochar-blended composting of regional waste biomass.
Sonoki T, Matsumoto K, Jindo K, Sudo H, Sasaki Y.
Transactions of the Materials Research Society of Japan. 35 ( 4 ) 909 - 912 2010.12
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Effects of biochar- and pyroligneous acid-blended compost made by regional waste biomass of Aomori .
Matsumoto K, Jindo K, Suto K, Sudo H, Sasaki Y, Sonoki T.
Wood carbonization Research 7 ( 2 ) 63 - 67 2010.10
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Overexpression of a fungal laccase gene induces non-dehiscent anthers and morphological changes in flowers of transgenic tobacco.
Nasrin Z, Yoshikawa M, Nakamura Y, Begum S, Uesugi M, Osakabe Y, Sonoki T, Sato K, Funada R, Iimura Y, Katayama Y, Kajita S.
Journal of Wood Science 56 460 - 469 2010.7
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Methoxyl groups of lignin are essential carbon donors in C1 metabolism of Sphingobium sp. SYK-6
Tomonori Sonoki, Eiji Masai, Kanna Sato, Shinya Kajita, Yoshihiro Katayama
JOURNAL OF BASIC MICROBIOLOGY 49 ( SUPPL. 1 ) S98 - S102 2009.9
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Hybrid aspen with a transgene for fungal manganese peroxidase is a potential contributor to phytoremediation of the environment contaminated with bisphenol A.
Iimura Y, Yoshizumi M, Sonoki T, Uesugi M, Tatsumi K, Horiuchi K, Kajita S, Katayama Y.
Journal of Wood Science 53 ( 6 ) 541 - 544 2007.12
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Functional coupling between Vanillate O-demethylase and formaldehyde detoxification pathway.
Hibi M, Sonoki T, Mori H.
FEMS Microbiology Letters. 253 ( 2 ) 237 - 242 2005.12
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Transgenic tobacco expressing fungal laccase promotes the detoxification of environmental pollutants.
Sonoki T, Kajita S, Ikeda S, Uesugi M, Tatsumi K, Katayama Y, Iimura Y.
Applied Microbiology and Biotechnology 67 ( 1 ) 138 - 142 2005.4
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A novel tetrahydrofolate-dependent O-demethylase gene is essential for growth of Sphingomonas paucimobilis SYK-6 with syringate.
Masai E, Sasaki M, Minakawa Y, Abe T, Sonoki T, Miyauchi K, Katayama Y, Fukuda M.
Journal of Bacteriology 186 ( 9 ) 2757 - 2765 2004.5
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Detection and characterization of a novel extracellular fungal enzyme that catalyzes the specific and hydrolytic cleavage of lignin guaiacyl glycerol β-aryl ether linkages.
Otsuka Y, Sonoki T, Ikeda S, Kajita S, Nakamura M, Katayama Y.
European Journal of Biochemistry 270 1 - 10 2003.4
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Specific degradation of β-aryl ether linkage in synthetic lignin (dehydrogenative polymerizate) by bacterial enzymes of Sphingomonas paucimobilis SYK-6 produced in recombinant Escherichia coli.
Sonoki T, Iimura Y, Masai E, Kajita S, Katayama Y.
Journal of Wood Science 48 429 - 433 2002.12
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Tetrahydrofolate-dependent vanillate and syringate O-demethylation links tightly to one-carbon metabolic pathway associated with amino acid synthesis and DNA methylation in the lignin metabolism of Sphingomonas paucimobilis SYK-6.
Sonoki T, Otsuka Y, Ikeda S, Masai E, Kajita S, Katayama Y.
Journal of Wood Science 48 434 - 439 2002.10
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Expression of a gene for Mn-peroxidase from Coriolus versicolor in transgenic tobacco generates potential tools for phytoremediation
Y Iimura, S Ikeda, T Sonoki, T Hayakawa, S Kajita, K Kimbara, K Tatsumi, Y Katayama
APPLIED MICROBIOLOGY AND BIOTECHNOLOGY 59 ( 2-3 ) 246 - 251 2002.7
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Close association between the enzyme involved in the lignin metabolic pathway of Sphingomonas paucimobilis SYK-6: interaction of the O-demethylase (LigX) and ring fission dioxygenase (LigZ).
Sonoki T, Otsuka Y, Ikeda S, Masai E, Kajita S, Katayama Y.
Journal of Wood Science 48 250 - 252 2002.6
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Coexistence of two different O demethylation systems in lignin metabolism by Sphingomonas paucimobilis SYK-6: cloning and sequencing of the lignin biphenyl-specific O-demethylase (LigX) gene.
Sonoki T, Obi T, Kubota S, Higashi M, Masai E, Katayama Y.
Applied and Environmental Microbiology. 66 ( 5 ) 2125 - 2132 2000.5
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Cloning and sequencing of the Sphingomonas(Pseudomonas) paucimobilis gene essential for the O demethylation of vanillate and syringate.
Nishikawa S, Sonoki T, Kasahara T, Obi T, Kubota S, Kawai S, Morohoshi N, Katayama Y.
Applied and Environmental Microbiology 64 ( 3 ) 836 - 842 1999.3