日本分子生物学会

(p)ppGpp-dependent and -independent pathways for salt tolerance in Escherichia coli.

Tarusawa T, Ito S, Goto S, Ushida C, Muto A, Himeno H

Journal of biochemistry   160 ( 1 )   19 - 26   2016.7

Sequence and structure analysis of a mirror tRNA located upstream of the cytochrome oxidase I mRNA in mouse mitochondria.

Saya Okui, Chisato Ushida, Hidenori Kiyosawa, Gota Kawai

Journal of Biochemistry   159 ( 3 )   341 - 350   2016.3

Sequence and structure analysis of a mirror tRNA located upstream of the cytochrome oxidase I mRNA in mouse mitochondria.

Okui S, Ushida C, Kiyosawa H, Kawai G

Journal of biochemistry   159 ( 3 )   341 - 50   2016.3

(p)ppGpp-dependent and -independent pathways for salt tolerance in Escherichia coli.

Takefusa Tarusawa, Shion Ito, Simon Goto, Chisato Ushida, Akira Muto, Hyouta Himeno

Journal of Biochemistry   2016.1

Secondary structure-based analysis of mouse brain small RNA sequences obtained by using next-generation sequencing.

Hidenori Kiyosawa, Akio Okumura, Saya Okui, Chisato Ushida, Gota Kawai

Genomics   106 ( 2 )   122 - 128   2015.8

Secondary structure-based analysis of mouse brain small RNA sequences obtained by using next-generation sequencing.

Kiyosawa H, Okumura A, Okui S, Ushida C, Kawai G

Genomics   106 ( 2 )   122 - 8   2015.8

Functional genomics of small structured ncRNAs

( 41 )   15 - 18   2014.12

small structured ncRNAの機能ゲノミクス

牛田 千里

日本マイコプラズマ学会雑誌   41   15 - 18   2014

A model of the intracellular response of an olfactory neuron in Caenorhabditis elegans to odor stimulation.

7   e42907   2012.8

A model of the intracellular response of an olfactory neuron in Caenorhabditis elegans to odor stimulation.

Usuyama M, Ushida C, Shingai R

PloS one   7 ( 8 )   e42907   2012

特集 細胞核-構造と機能 4.核小体 Small subunit processome

牛田 千里, 藤原 俊伸

生体の科学   62 ( 5 )   418 - 419   2011.10

特集 細胞核-構造と機能 4.核小体 核小体タンパク質フィブリラリン

牛田 千里, 藤原 俊伸

生体の科学   62 ( 5 )   420 - 421   2011.10

A small nucleolar RNA functions in rRNA processing in C. elegans.

Hokii, Y., Sasano, Y., Sato, M., Sakamoto, H., Sakata, K., Shingai, R., Taneda, A., Oka, S., Himeno, H., Muto, A., Fujiwara, T., Ushida, C.

Nucleic Acids Research   38 ( 17 )   5909 - 5918   2010.9

A small nucleolar RNA functions in rRNA processing in Caenorhabditis elegans.

Hokii Y, Sasano Y, Sato M, Sakamoto H, Sakata K, Shingai R, Taneda A, Oka S, Himeno H, Muto A, Fujiwara T, Ushida C

Nucleic acids research   38 ( 17 )   5909 - 18   2010.9

Trans-Translation is Involved in the CcpA-Dependent Tagging and Degradation of TreP in Bacillus subtilis

UJIIE Hiromi, MATSUTANI Tomoko, TOMATSU Hisashi, FUJIHARA Ai, USHIDA Chisato, MIWA Yasuhiko, FUJITA Yasutaro, HIMENO Hyouta, MUTO Akira

Journal of Biochemistry   145 ( 1 )   59 - 66   2009.1

Trans-translation is involved in the CcpA-dependent tagging and degradation of TreP in Bacillus subutilis.

Ujiie, H., Matsutani, T., Tomatsu, H., Fujihara, A., Ushida, C., Miwa, Y., Fujita, Y., Himeno, H., Muto, A.

Journal of Biochemistry   45   59 - 66   2009.1

Trans-translation is involved in the CcpA-dependent tagging and degradation of TreP in Bacillus subtilis.

Ujiie H, Matsutani T, Tomatsu H, Fujihara A, Ushida C, Miwa Y, Fujita Y, Himeno H, Muto A

Journal of biochemistry   145 ( 1 )   59 - 66   2009.1

tmRNA-dependent trans-translation is required for sporulation in Bacillus subtilis.

Abe, T., Sakaki, K., Fujihara, A., Ujiie, H., Ushida, C., Himeno, H., Sato, T., Muto, A.

Molecular Microbiology   69   1491 - 1498   2008.9

tmRNA-dependent trans-translation is required for sporulation in Bacillus subtilis.

Abe T, Sakaki K, Fujihara A, Ujiie H, Ushida C, Himeno H, Sato T, Muto A

Molecular microbiology   69 ( 6 )   1491 - 8   2008.9

Distribution of U3 small nucleolar RNA and fibrillarin during early embryogenesis in Caenorhabditis elegans.

Sasano, Y., Hokii, Y., Inoue, K., Sakamoto, H., Ushida, C., Fujiwara, T.

Biochimie   90   898 - 907   2008.6

Distribution of U3 small nucleolar RNA and fibrillarin during early embryogenesis in Caenorhabditis elegans.

Sasano Y, Hokii Y, Inoue K, Sakamoto H, Ushida C, Fujiwara T

Biochimie   90 ( 6 )   898 - 907   2008.6

Twelve novel C. elegans RNA candidates isolated by two-dimensional polyacrylamide gel electrophoresis.

Hokii Y, Kubo A, Ogasawara T, Nogi Y, Taneda A, Arai R, Muto A, Ushida C

Gene   365   83 - 7   2006.1

Twelve novel C. elegans RNA candidates isolated by two-dimensional polyacrylamide gel electrophoresis.（共著）

Hokii, Y., Kubo, A., Ogasawara, T., Nogi, Y., Taneda, A., Arai, R., Muto, A., Ushida, C.

Gene   365   83 - 87   2006.1

Twelve novel C. elegans RNA candidates isolated by two-dimensional polyacrylamide gel electrophoresis

牛田 千里

Gene 365   83 - 87   2005

A novel GTPase activated by the small subunit of ribosome.（共著）

Himeno, H., Hanawa-Suetsugu, K., Kimura, T., Takagi, K., Sugiyama, W., Shirata, S., Mikami, T., Odagiri, F., Osanai, Y., Watanabe, D., Goto, S., Kalachnyuk, L., Ushida, C., Muto, A.

Nucleic Acids Research   32   5303 - 5309   2004.10

Isolation of eight novel Caenorhabditis elegans small RNAs.（共著）

Wachi, M., Ogawa, T., Yokoyama, K., Hokii, Y., Shimoyama, M., Muto, A., Ushida, C.

Gene   335   47 - 56   2004.3

線虫の非翻訳RNA

牛田 千里

細胞工学 23巻10号   1186 - 1192   2004

Mapping of MCS4 RNA genes in M. capricolum subsp. capricolum strains California kid and GM262G. "jointly worked"

Ushida, C., Miyata, M., Siugzdaite, J., Muto, A.

Japanese Journal of Mycoplasmology   ( 30 )   36 - 37   2003.10

Mapping of the MCS4 RNA genes in the genomes of Mycoplasma capricolum subsp. capricolum strains California kid and GM 262 G

USHIDA Chisato, MIYATA Makoto, SIUGZDAITE Jurate, MUTO Akira

30   36 - 37   2003.10

Distribution of the MCS4 RNA genes in mycoplasmas belonging to the Mycoplasma mycoides cluster.

Ushida C, Yoshida A, Miyakawa Y, Ara Y, Muto A

Gene   314   149 - 55   2003.9

Distribution of the MCS4 RNA genes in mycoplasmas belonging to the Mycoplasma mycoides cluster. （共著）

Ushida, C., Yoshida, A., Miyakawa, Y., Ara, Y., Muto, A.

Gene   314   149 - 155   2003.5

Central region of the human splicing factor Hprp3p interacts with Hprp4p.

Gonzalez-Santos JM, Wang A, Jones J, Ushida C, Liu J, Hu J

The Journal of biological chemistry   277 ( 26 )   23764 - 72   2002.6

Asparaginyl-tRNA synthetase activity of Mycoplasma capricolum MCS4 RNA binding element 2 (MCS4BE2)

YOKOYAMA K., SASAKI T., ANDO K., MATSUDA T., USHIDA C., MUTO A.

27   70 - 71   2000.12

Species specificity and binding protein of Mycoplasma capricolum MCS4 RNA

USHIDA Senri, ANDO Kouhei, MATSUDA Takashi, MUTOU Akira

Japanese journal of mycoplasmology   26   15 - 17   1999.12

Specific binding proteins of M. capricolum MCS4 RNA

ANDO K., MATUDA T., USHIDA C., MUTO A.

25   88 - 90   1998.12

Small stable RNAs of Mycoplasma capricolum

USHIDA Chisato, SASAKI Tetsuharu, ANDO Kouhei, MATSUDA Takayoshi, MUTO Akira

24   18 - 21   1997.12

Probing the Secondary Structure of MCS4 RNA of Mycoplasma capricolun

USHIDA Chisato, SASAMURA Shinpei, MUTO Akira

The Journal of Biochemistry   122 ( 6 )   1202 - 1207   1997.12

Probing the Secondary Structure of MCS4 RNA of Mycoplasma capricolm.

Ushida Chisato, Sasamura Shinpei, Muto Akira

J Biochem (Tokyo)   122 ( 6 )   1202 - 1207   1997

Small stable RNAs in Mycoplasma capricolum

USHIDA CHISATO, SASAKI TETSUHARU, ISHII KAZUYOSHI, UENO AKIO, NISHIDA TAKAKO, MUTO AKIRA

23   78 - 81   1996.12

10Sa RNAリボソームの相互作用

只木 敏雅, 姫野 俵太, 福島 雅昭, 佐藤 正和, 牛田 千里, 武藤 〓

日本分子生物学会年会プログラム・講演要旨集   19   473   1996.8

枯草菌10Sa RNA機能の遺伝的解析

松野 潤, 葛西 七重, 西田 貴子, 牛田 千里, 姫野 俵太, 武藤 〓

日本分子生物学会年会プログラム・講演要旨集   19   473   1996.8

mRNAとtRNAの機能を持つRNA(10Sa RNA)について

佐藤 正和, 姫野 俵太, 只木 敏雅, 福島 雅昭, 牛田 千里, 武藤 〓

日本分子生物学会年会プログラム・講演要旨集   19   472   1996.8

Small stable RNAs of Mycoplasma capricolum

USHIDA Chisato, MUTO Akira

21   13 - 14   1995.10

The discovery of RNAi

Ushida, C.

Heredity, Biological Science   61 ( 1 )   4 - 5   2007.1

C. elegans noncoding RNA

Cell technology   23 ( 10 )   1186 - 1192   2004.10

Isolation of eight novel Caenorhabditis elegans small RNAs

M Wachi, T Ogawa, K Yokoyama, Y Hokii, M Shimoyama, A Muto, C Ushida

GENE   335   47 - 56   2004.6

A novel GTPase activated by the small subunit of ribosome

H Himeno, K Hanawa-Suetsugu, T Kimura, K Takagi, W Sugiyama, S Shirata, T Mikami, F Odagiri, Y Osanai, D Watanabe, S Goto, L Kalachnyuk, C Ushida, A Muto

NUCLEIC ACIDS RESEARCH   32 ( 17 )   5303 - 5309   2004

Distribution of the MCS4 RNA genes in mycoplasmas belonging to the Mycoplasma mycoides cluster

C Ushida, A Yoshida, Y Miyakawa, Y Ara, A Muto

GENE   314   149 - 155   2003.9

Distribution of the MCS4 RNA genes in mycoplasmas belonging to the Mycoplasma mycoides cluster

C Ushida, A Yoshida, Y Miyakawa, Y Ara, A Muto

GENE   314   149 - 155   2003.9

Big world of small RNAs

Ushida, C.

1 ( 2 )   26 - 29   2003.1

Central region of the human splicing factor Hprp3p interacts with Hprp4p

JM Gonzalez-Santos, A Wang, J Jones, C Ushida, J Liu, J Hu

JOURNAL OF BIOLOGICAL CHEMISTRY   277 ( 26 )   23764 - 23772   2002.6

Detection of tmRNA-mediated froms-translation products in Bacillus subtilis

Genes to Cells   7(3), 343-350 ( 3 )   343 - 50   2002

Requirement of transfer-messenger RNA for the growth of Bacillus subtilis under stresses

A Muto, A Fujihara, K Ito, J Matsuno, C Ushida, H Himeno

GENES TO CELLS   5 ( 8 )   627 - 635   2000.8

Requirement of transfer-messenger RNA for the growth of Bacillus subtilis under stresses

A Muto, A Fujihara, K Ito, J Matsuno, C Ushida, H Himeno

GENES TO CELLS   5 ( 8 )   627 - 635   2000.8

A bacterial RNA that functions as both a tRNA and an mRNA

A Muto, C Ushida, H Himeno

TRENDS IN BIOCHEMICAL SCIENCES   23 ( 1 )   25 - 29   1998.1

Probing the secondary structure of MCS4 RNA of Mycoplasma capricolum

C Ushida, S Sasamura, A Muto

JOURNAL OF BIOCHEMISTRY   122 ( 6 )   1202 - 1207   1997.12

In vitro trans translation mediated by alanine-charged 10Sa RNA

H Himeno, M Sato, T Tadaki, M Fukushima, C Ushida, A Muto

JOURNAL OF MOLECULAR BIOLOGY   268 ( 5 )   803 - 808   1997.5

Interaction of 10Sa RNA with ribosomes in Escherichia coli

T Tadaki, M Fukushima, C Ushida, H Himeno, A Muto

FEBS LETTERS   399 ( 3 )   223 - 226   1996.12

Novel small stable RNAs of Mycoplasma capricolum

Chisato Ushida, Akira Muto

DNA Research   2 ( 5 )   229 - 230   1995

Helical phase dependent action of CRP: Effect of the distance between the CRP site and the -35 region on promoter activity

C. Ushida, H. Aiba

Nucleic Acids Research   18 ( 21 )   6325 - 6330   1990.11