Papers - FUJII Hodaka
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Sequence-specific inhibition of reverse transcription by recombinant CRISPR/dCas13a ribonucleoprotein complexes in vitro
Toshitsugu Fujita, Shoko Nagata, Miyuki Yuno, Hodaka Fujii
Biology Methods and Protocols 6 ( 1 ) bpab009 2021.1
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MSCV-based retroviral plasmids expressing 3xFLAG-Sp-dCas9 for enChIP analysis.
Miyuki Yuno, Shoko Nagata, Toshitsugu Fujita, Hodaka Fujii
Biology methods & protocols 6 ( 1 ) bpab013 2021
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pSIR-bsr, a self-inactivating retrovirus vector expressing the blasticidin S-resistance gene.
Fujii H
Biology Methods & Protocols 6 ( 1 ) bpab022 2021
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SAMHD1-mediated dNTP degradation is required for efficient DNA repair during antibody class switch recombination.
Afzal Husain, Jianliang Xu, Hodaka Fujii, Mikiyo Nakata, Maki Kobayashi, Ji-Yang Wang, Jan Rehwinkel, Tasuku Honjo, Nasim A Begum
EMBO Journal 39 ( 15 ) e102931 - e102931 2020.8
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Discrimination of CpG Methylation Status and Nucleotide Differences in Tissue Specimen DNA by Oligoribonucleotide Interference-PCR.
Takeshi Shimizu, Toshitsugu Fujita, Sakie Fukushi, Yuri Horino, Hodaka Fujii
International Journal of Molecular Sciences 21 ( 14 ) 2020.7
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A distal enhancer at risk locus 11q13.5 promotes suppression of colitis by T reg cells
Rabab Nasrallah, Charlotte J Imianowski, Lara Bossini-Castillo, Francis M Grant, Mikail Dogan, Lindsey Placek, Lina Kozhaya, Paula Kuo, Firas Sadiyah, Sarah K Whiteside, Maxwell R Mumbach, Dafni Glinos, Panagiota Vardaka, Carly E Whyte, Teresa Lozano, Toshitsugu Fujita, Hodaka Fujii, Adrian Liston, Simon Andrews, Adeline Cozzani, Jie Yang, Suman Mitra, Enrico Lugli, Howard Y Chang, Derya Unutmaz, Gosia Trynka, Rahul Roychoudhuri
Nature 583 ( 7816 ) 447 - 452 2020.6
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Simultaneous detection of the T790M and L858R mutations in the EGFR gene by oligoribonucleotide interference-PCR
FUJII Hodaka
International Journal of Molecular Sciences 20 ( 16 ) 4020 2019.8
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Target enrichment from a DNA mixture by oligoribonucleotide interference-PCR (ORNi-PCR)
FUJII Hodaka
Biology Methods & Protocols 4 ( 1 ) bpz009 2019.8
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Normal B cell development and Pax5 expression in Thy28/ThyN1-deficient mice
FUJII Hodaka
PLoS One 14 ( 7 ) e0220199 - e0220199 2019.7
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A refined two-step oligoribonucleotide interference-PCR method for precise discrimination of nucleotide differences
FUJII Hodaka
Scientific Reports 8 ( 1 ) 17195 - 17195 2018.11
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Detection of genome-edited cells by oligoribonucleotide interference-PCR.
Fujita T, Yuno M, Kitaura F, Fujii H
DNA research : an international journal for rapid publication of reports on genes and genomes 25 ( 4 ) 395 - 407 2018.8
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An enChIP system for the analysis of bacterial genome functions
Toshitsugu Fujita, Miyuki Yuno, Hodaka Fujii
BMC Research Notes 11 ( 1 ) 387 - 387 2018.6
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Promoter-associated proteins of EPAS1 identified by enChIP-MS – A putative role of HDX as a negative regulator
Arash Hamidian, Marica Vaapil, Kristoffer von Stedingk, Toshitsugu Fujita, Camilla U. Persson, Pontus Eriksson, Srinivas Veerla, Katleen De Preter, Frank Speleman, Hodaka Fujii, Sven Påhlman, Sofie Mohlin
Biochemical and Biophysical Research Communications 499 ( 2 ) 291 - 298 2018.5
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EnChIP systems using different CRISPR orthologues and epitope tags
Toshitsugu Fujita, Miyuki Yuno, Hodaka Fujii
BMC Research Notes 11 ( 1 ) 154 - 154 2018.2
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Transgenic mouse lines expressing the 3xFLAG-dCas9 protein for enChIP analysis
Toshitsugu Fujita, Fusako Kitaura, Asami Oji, Naoki Tanigawa, Miyuki Yuno, Masahito Ikawa, Ichiro Taniuchi, Hodaka Fujii
Genes to Cells 23 ( 4 ) 318 - 325 2018.2
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Locus-specific ChIP combined with NGS analysis reveals genomic regulatory regions that physically interact with the Pax5 promoter in a chicken B cell line
Toshitsugu Fujita, Fusako Kitaura, Miyuki Yuno, Yutaka Suzuki, Sumio Sugano, Hodaka Fujii
DNA RESEARCH 24 ( 5 ) 537 - 548 2017.10
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Identification of physical interactions between genomic regions by enChIP-Seq
Toshitsugu Fujita, Miyuki Yuno, Yutaka Suzuki, Sumio Sugano, Hodaka Fujii
GENES TO CELLS 22 ( 6 ) 506 - 520 2017.6
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The role of platelet and endothelial GARP in thrombosis and hemostasis
Elien Vermeersch, Frederik Denorme, Wim Maes, Simon F. De Meyer, Karen Vanhoorelbeke, Justin Edwards, Ethan M. Shevach, Derya Unutmaz, Hodaka Fujii, Hans Deckmyn, Claudia Tersteeg
PLOS ONE 12 ( 3 ) e0173329 - e0173329 2017.3
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Allele-specific locus binding and genome editing by CRISPR at the p16INK4a locus
Toshitsugu Fujita, Miyuki Yuno, Hodaka Fujii
SCIENTIFIC REPORTS 6 30485 - 30485 2016.7
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Efficient sequence-specific isolation of DNA fragments and chromatin by in vitro enChIP technology using recombinant CRISPR ribonucleoproteins
Toshitsugu Fujita, Miyuki Yuno, Hodaka Fujii
GENES TO CELLS 21 ( 4 ) 370 - 377 2016.2