Idiopathic pulmonary fibrosis-specific Bayesian network integrating extracellular vesicle proteome and clinical information

Mei Tomoto, Yohei Mineharu, Noriaki Sato, Yoshinori Tamada, Mari Nogami-Itoh, Masataka Kuroda, Jun Adachi, Yoshito Takeda, Kenji Mizuguchi, Atsushi Kumanogoh, Yayoi Natsume-Kitatani, Yasushi Okuno

Scientific Reports   14 ( 1 )   1315   2024.1

Choroid plexus enlargement in mild cognitive impairment on MRI: a large cohort study.

Umemura Y, Watanabe K, Kasai S, Ide S, Ishimoto Y, Sasaki M, Nagaya H, Tatsuo S, Mikami T, Tamada Y, Tomiyama M, Kakeda S

European radiology   2024.1

Altered structural hippocampal intra-networks in a general elderly Japanese population with mild cognitive impairment.

Kasai S, Watanabe K, Umemura Y, Ishimoto Y, Sasaki M, Nagaya H, Tatsuo S, Mikami T, Tamada Y, Ide S, Tomiyama M, Matsuzaka M, Kakeda S

Scientific reports   13 ( 1 )   13330   2023.8

Individual health-disease phase diagrams for disease prevention based on machine learning

Kazuki Nakamura, Eiichiro Uchino, Noriaki Sato, Ayano Araki, Kei Terayama, Ryosuke Kojima, Koichi Murashita, Ken Itoh, Tatsuya Mikami, Yoshinori Tamada, Yasushi Okuno

Journal of Biomedical Informatics   144   104448 - 104448   2023.8

Inhibition of the bone morphogenetic protein pathway suppresses tumor growth through downregulation of epidermal growth factor receptor in MEK/ERK-dependent colorectal cancer.

Shota Shimizu, Jumpei Kondo, Kunishige Onuma, Roberto Coppo, Kasumi Ota, Mayumi Kamada, Yohei Harada, Yoshihisa Tanaka, Mai Adachi Nakazawa, Yoshinori Tamada, Yasushi Okuno, Kenji Kawada, Kazutaka Obama, Robert J Coffey, Yoshiyuki Fujiwara, Masahiro Inoue

Cancer science   114 ( 9 )   3636 - 3648   2023.6

Definition of a Dietary Pattern Expressing the Intake of Vegetables and Fruits and Its Association with Intestinal Microbiota.

Yamauchi T, Koyama N, Hirai A, Suganuma H, Suzuki S, Murashita K, Mikami T, Tamada Y, Sato N, Imoto S, Itoh K, Nakaji S

Nutrients   15 ( 9 )   2023.4

Multiomics and artificial intelligence enabled peripheral blood-based prediction of amnestic mild cognitive impairment

Yota Tatara, Hiromi Yamazaki, Fumiki Katsuoka, Mitsuru Chiba, Daisuke Saigusa, Shuya Kasai, Tomohiro Nakamura, Jin Inoue, Yuichi Aoki, Miho Shoji, Ikuko N. Motoike, Yoshinori Tamada, Katsuhito Hashizume, Mikio Shoji, Kengo Kinoshita, Koichi Murashita, Shigeyuki Nakaji, Masayuki Yamamoto, Ken Itoh

Current Research in Translational Medicine   71 ( 1 )   103367 - 103367   2023.1

Effect of gut microbial composition and diversity on major inhaled allergen sensitization and onset of allergic rhinitis

Yamaguchi Taimu, Nomura Ayami, Matsubara Atsushi, Hisada Takayoshi, Tamada Yoshinori, Mikami Tatsuya, Ishida Mizuri

Allergology International   72 ( 1 )   135 - 142   2023

AI target prediction Using Fugaku and gene network analysis

Tamada Yoshinori

Proceedings for Annual Meeting of The Japanese Pharmacological Society   97 ( 0 )   1-B-S04-1   2023

Association of Gut Microbial Genera with Heart Rate Variability in the General Japanese Population: The Iwaki Cross-Sectional Research Study.

Masaya Tsubokawa, Miyuki Nishimura, Tatsuya Mikami, Mizuri Ishida, Takayoshi Hisada, Yoshinori Tamada

Metabolites   12 ( 8 )   2022.8

Correlation between Glycation-Related Biomarkers and Quality of Life in the General Japanese Population: The Iwaki Cross-Sectional Research Study.

Tsubokawa M, Nishimura M, Murashita K, Iwane T, Tamada Y

International journal of environmental research and public health   19 ( 15 )   2022.7

Factors Associated with Reduced Heart Rate Variability in the General Japanese Population: The Iwaki Cross-Sectional Research Study.

Tsubokawa M, Nishimura M, Tamada Y, Nakaji S

Healthcare (Basel, Switzerland)   10 ( 5 )   2022.4

CBNplot: Bayesian network plots for enrichment analysis.

Sato N, Tamada Y, Yu G, Okuno Y

Bioinformatics (Oxford, England)   38 ( 10 )   2959 - 2960   2022.3

Two Blautia Species Associated with Visceral Fat Accumulation: A One-Year Longitudinal Study.

Naoki Ozato, Tohru Yamaguchi, Kenta Mori, Mitsuhiro Katashima, Mika Kumagai, Koichi Murashita, Yoshihisa Katsuragi, Yoshinori Tamada, Masanori Kakuta, Seiya Imoto, Kazushige Ihara, Shigeyuki Nakaji

Biology   11 ( 2 )   2022.2

Novel cancer subtyping method based on patient-specific gene regulatory network.

Mai Adachi Nakazawa, Yoshinori Tamada, Yoshihisa Tanaka, Marie Ikeguchi, Kako Higashihara, Yasushi Okuno

Scientific reports   11 ( 1 )   23653 - 23653   2021.12

Dynamic changes in gene-to-gene regulatory networks in response to SARS-CoV-2 infection

Yoshihisa Tanaka, Kako Higashihara, Mai Adachi Nakazawa, Fumiyoshi Yamashita, Yoshinori Tamada, Yasushi Okuno

Scientific Reports   11 ( 1 )   11241 - 11241   2021.5

Classification of glomerular pathological findings using deep learning and nephrologist–AI collective intelligence approach

Eiichiro Uchino, Kanata Suzuki, Noriaki Sato, Ryosuke Kojima, Yoshinori Tamada, Shusuke Hiragi, Hideki Yokoi, Nobuhiro Yugami, Sachiko Minamiguchi, Hironori Haga, Motoko Yanagita, Yasushi Okuno

International Journal of Medical Informatics   141   104231 - 104231   2020.9

Variant analysis of prostate cancer in Japanese patients and a new attempt to predict related biological pathways.

Rika Kasajima, Rui Yamaguchi, Eigo Shimizu, Yoshinori Tamada, Atsushi Niida, George Tremmel, Takeshi Kishida, Ichiro Aoki, Seiya Imoto, Satoru Miyano, Hiroji Uemura, Yohei Miyagi

Oncology reports   43 ( 3 )   943 - 952   2020.3

System-based differential gene network analysis for characterizing a sample-specific subnetwork

Yoshihisa Tanaka, Yoshinori Tamada, Marie Ikeguchi, Fumiyoshi Yamashita, Yasushi Okuno

Biomolecules   10 ( 2 )   2020.2

Memory efficient parallel algorithm for optimal DAG structure search using direct communication

Yoshinori Tamada

Journal of Parallel and Distributed Computing   119   27 - 35   2018

Oncogenic roles of TOPK and MELK, and effective growth suppression by small molecular inhibitors in kidney cancer cells

Taigo Kato, Hiroyuki Inoue, Seiya Imoto, Yoshinori Tamada, Takashi Miyamoto, Yo Matsuo, Yusuke Nakamura, Jae-Hyun Park

Oncotarget   7 ( 14 )   17652 - 64   2016.4

The hnRNP-Htt axis regulates necrotic cell death induced by transcriptional repression through impaired RNA splicing

Y. Mao, T. Tamura, Y. Yuki, D. Abe, Y. Tamada, S. Imoto, H. Tanaka, H. Homma, K. Tagawa, S. Miyano, H. Okazawa

CELL DEATH & DISEASE   7   e2207   2016.4

Efficient parallel algorithm for optimal DAG structure search on parallel computer with torus network

Honda, H., Tamada, Y., Suda, R.

Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)   10048 LNCS   2016

Elevated β-catenin pathway as a novel target for patients with resistance to EGF receptor targeting drugs

Asuka Nakata, Ryo Yoshida, Rui Yamaguchi, Mai Yamauchi, Yoshinori Tamada, Andre Fujita, Teppei Shimamura, Seiya Imoto, Tomoyuki Higuchi, Masaharu Nomura, Tatsuo Kimura, Hiroshi Nokihara, Masahiko Higashiyama, Kazuya Kondoh, Hiroshi Nishihara, Arinobu Tojo, Seiji Yano, Satoru Miyano, Noriko Gotoh

Scientific Reports   5 ( 1 )   13076   2015.8

Lung adenocarcinoma subtypes definable by lung development-related miRNA expression profiles in association with clinicopathologic features

Chinatsu Arima, Taisuke Kajino, Yoshinori Tamada, Seiya Imoto, Yukako Shimada, Masahiro Nakatochi, Motoshi Suzuki, Hisanori Isomura, Yasushi Yatabe, Tomoya Yamaguchi, Kiyoshi Yanagisawa, Satoru Miyano, Takashi Takahashi

Carcinogenesis   35 ( 10 )   2224 - 2231   2014.6

Vasohibin-1 is identified as a master-regulator of endothelial cell apoptosis using gene network analysis

Muna Affara, Debbie Sanders, Hiromitsu Araki, Yoshinori Tamada, Benjamin J Dunmore, Sally Humphreys, Seiya Imoto, Christopher Savoie, Satoru Miyano, Satoru Kuhara, David Jeffries, Cristin Print, D Stephen Charnock-Jones

BMC Genomics   14 ( 1 )   23 - 23   2013

Cell Cycle Gene Networks Are Associated with Melanoma Prognosis

Li Wang, Daniel G. Hurley, Wendy Watkins, Hiromitsu Araki, Yoshinori Tamada, Anita Muthukaruppan, Louis Ranjard, Eliane Derkac, Seiya Imoto, Satoru Miyano, Edmund J. Crampin, Cristin G. Print, Ying Xu

PLoS ONE   7 ( 4 )   e34247   2012.4

Computational gene network analysis reveals TNF-induced angiogenesis

Kentaro Ogami, Rui Yamaguchi, Seiya Imoto, Yoshinori Tamada, Hiromitsu Araki, Cristin Print, Satoru Miyano

BMC Systems Biology   6 ( Suppl 2 )   S12   2012

Gene network inference and visualization tools for biologists: application to new human transcriptome datasets

Daniel Hurley, Hiromitsu Araki, Yoshinori Tamada, Ben Dunmore, Deborah Sanders, Sally Humphreys, Muna Affara, Seiya Imoto, Kaori Yasuda, Yuki Tomiyasu, Kosuke Tashiro, Christopher Savoie, Vicky Cho, Stephen Smith, Satoru Kuhara, Satoru Miyano, D. Stephen Charnock-Jones, Edmund J. Crampin, Cristin G. Print

Nucleic Acids Research   40 ( 6 )   2377 - 2398   2011.11

Estimating Genome-Wide Gene Networks Using Nonparametric Bayesian Network Models on Massively Parallel Computers

Y Tamada, S Imoto, H Araki, M Nagasaki, C Print, D S Charnock-Jones, S Miyano

IEEE/ACM Transactions on Computational Biology and Bioinformatics   8 ( 3 )   683 - 697   2011.5

SiGN-SSM: Open source parallel software for estimating gene networks with state space models

Tamada, Y., Yamaguchi, R., Imoto, S., Hirose, O., Yoshida, R., Nagasaki, M., Miyano, S.

Bioinformatics   27 ( 8 )   1172 - 3   2011

Searching optimal Bayesian network structure on constraint search space: Super-structure approach

Imoto, S., Kojima, K., Perrier, E., Tamada, Y., Miyano, S.

Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)   6797 LNAI   2011

Parallel algorithm for learning optimal bayesian network structure

Tamada, Y., Imoto, S., Miyano, S.

Journal of Machine Learning Research   12   2011

Collocation-based sparse estimation for constructing dynamic gene networks.

Shimamura T, Imoto S, Nagasaki M, Yamauchi M, Yamaguchi R, Fujita A, Tamada Y, Gotoh N, Miyano S

Genome informatics. International Conference on Genome Informatics   24   164 - 78   2010

Analysis of PPARα-dependent and PPARα-independent transcript regulation following fenofibrate treatment of human endothelial cells

Hiromitsu Araki, Yoshinori Tamada, Seiya Imoto, Ben Dunmore, Deborah Sanders, Sally Humphrey, Masao Nagasaki, Atsushi Doi, Yukiko Nakanishi, Kaori Yasuda, Yuki Tomiyasu, Kousuke Tashiro, Cristin Print, D. Stephen Charnock-Jones, Satoru Kuhara, Satoru Miyano

Angiogenesis   12 ( 3 )   221 - 229   2009.4

Gene networks viewed through two models

Miyano, S., Yamaguchi, R., Tamada, Y., Nagasaki, M., Imoto, S.

Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)   5462 LNBI   2009

Unraveling dynamic activities of autocrine pathways that control drug-response transcriptome networks.

Yoshinori Tamada, Hiromitsu Araki, Seiya Imoto, Masao Nagasaki, Atsushi Doi, Yukiko Nakanishi, Yuki Tomiyasu, Kaori Yasuda, Ben Dunmore, Deborah Sanders, Sally Humphreys, Cristin Print, D Stephen Charnock-Jones, Kousuke Tashiro, Satoru Kuhara, Satoru Miyano

Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing   251 - 63   2009

A novel strategy to search conserved transcription factor binding sites among coexpressing genes in human.

Hatanaka Y, Nagasaki M, Yamaguchi R, Obayashi T, Numata K, Fujita A, Shimamura T, Tamada Y, Imoto S, Kinoshita K, Nakai K, Miyano S

Genome informatics. International Conference on Genome Informatics   20   212 - 21   2008

Analysis of gene networks for drug target discovery and validation.

Imoto S, Tamada Y, Savoie CJ, Miyano S

Methods in molecular biology (Clifton, N.J.)   360   33 - 56   2007

Understanding endothelial cell apoptosis: What can the transcriptome, glycome and proteome reveal?

Affara, M., Dunmore, B., Savoie, C., Imoto, S., Tamada, Y., Araki, H., Charnock-Jones, D.S., Miyano, S., Print, C.

Philosophical Transactions of the Royal Society B: Biological Sciences   362 ( 1484 )   1469 - 87   2007

Graph Mining and Its Application to Statistical Modeling

54 ( 2 )   315 - 331   2006.12

Utilizing Heterogeneous Genomic Data to Estimate Gene Networks

54 ( 2 )   333 - 356   2006

Genomic data assimilation for estimating hybrid functional Petri net from time-course gene expression data.

Nagasaki M, Yamaguchi R, Yoshida R, Imoto S, Doi A, Tamada Y, Matsuno H, Miyano S, Higuchi T

Genome informatics. International Conference on Genome Informatics   17 ( 1 )   46 - 61   2006

From closed tree mining towards closed DAG mining

1 - 7   2006

Computational strategy for discovering druggable gene networks from genome-wide RNA expression profiles.

Seiya Imoto, Yoshinori Tamada, Hiromitsu Araki, Kaori Yasuda, Cristin G Print, Stephen D Charnock-Jones, Deborah Sanders, Christopher J Savoie, Kousuke Tashiro, Satoru Kuhara, Satoru Miyano

Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing   559 - 71   2006

Utilizing evolutionary information and gene expression data for estimating gene networks with Bayesian network models

Tamada, Y., Bannai, H., Imoto, S., Katayama, T., Kanehisa, M., Miyano, S.

Journal of Bioinformatics and Computational Biology   3 ( 6 )   1295 - 1313   2005

Identifying drug active pathways from gene networks estimated by gene expression data.

Tamada Y, Imoto S, Tashiro K, Kuhara S, Miyano S

Genome informatics. International Conference on Genome Informatics   16 ( 1 )   182 - 91   2005

Estimating gene regulatory networks and protein-protein interactions of Saccharomyces cerevisiae from multiple genome-wide data

Nariai, N., Tamada, Y., Imoto, S., Miyano, S.

Bioinformatics   21 ( SUPPL. 2 )   ii206 - 12   2005

Estimating gene networks from expression data and binding location data via Boolean networks

O Hirose, N Nariai, Y Tamada, H Bannai, S Imoto, S Miyano

COMPUTATIONAL SCIENCE AND ITS APPLICATIONS - ICCSA 2005, PT 3   3482   349 - 356   2005

Intrasplicing--analysis of long intron sequences.

Ott, S., Tamada, Y., Bannai, H., Nakai, K., Miyano, S.

Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing   2003

Estimating gene networks from gene expression data by combining Bayesian network model with promoter element detection

Tamada, Y., Kim, S., Bannai, H., Imoto, S., Tashiro, K., Kuhara, S., Miyano, S.

Bioinformatics   19 ( SUPPL. 2 )   ii227 - 36   2003

Fast algorithm for extracting multiple unordered short motifs using bit operations

Osamu Maruyama, Hideo Bannai, Yoshinori Tamada, Satoru Kuhara, Satoru Miyano

Information Sciences   146 ( 1-4 )   115 - 126   2002.10

Extensive feature detection of N-terminal protein sorting signals.

Bannai H, Tamada Y, Maruyama O, Nakai K, Miyano S

Bioinformatics (Oxford, England)   18 ( 2 )   298 - 305   2002.2

Foundations of designing computational knowledge discovery processes

Tamada, Y., Bannai, H., Maruyama, O., Miyano, S.

Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)   2281   2002

Fast algorithm for extracting multiple unordered short motifs using bit operations

O Maruyama, H Bannai, Y Tamada, S Kuhara, S Miyano

PROCEEDINGS OF THE 6TH JOINT CONFERENCE ON INFORMATION SCIENCES   1180 - 1185   2002

VML: A View Modeling Language for computational knowledge discovery

Bannai, H., Tamada, Y., Maruyama, O., Miyano, S.

Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)   2226   2001

Views: Fundamental Building Blocks in the Process of Knowledge Discovery

Hideo Bannai, Yoshinori Tamada, Osamu Maruyama, Satoru Miyano

Proceedings of the 14th International FLAIRS Conference   233 - 238   2001

HypothesisCreator: Concepts for Accelerating the Computational Knowledge Discovery Process.

Hideo Bannai, Yoshinori Tamada, Osamu Maruyama, Satoru Miyano

Electron. Trans. Artif. Intell.   5 ( B )   73 - 83   2001

Concepts for Accelerating the Computational Knowledge Discovery Process

Hideo Bannai, Yoshinori Tamada, Osamu Maruyama, Satoru Miyano

Linkoping Electronic Articles in Computer and Information Science   6   2001

岩木健康増進プロジェクト健診における食事栄養とロコモティブシンドロームとの関連

山本 晃子 , 中村 太朗 , 神通 寛子 , 長谷川 絵美 , 古田 千恵 , 岡辺 有紀 , 村下 公一 , 三上 達也 , 玉田 嘉紀 , 鄭 松尹 , 中路 重之

日本公衆衛生学会総会抄録集   81   213 - 213   2022.9

岩木健康増進プロジェクト健診における食事栄養とロコモティブシンドロームとの関連

山本 晃子, 中村 太朗, 神通 寛子, 長谷川 絵美, 古田 千恵, 岡辺 有紀, 村下 公一, 三上 達也, 玉田 嘉紀, 鄭 松尹, 中路 重之

日本公衆衛生学会総会抄録集   81回   213 - 213   2022.9

弘前COI岩木健康増進プロジェクト健診でのアミノインデックス生活習慣病リスクスクリーニング結果と生活習慣因子の関連

矢野 由紀 , 中村 英寛 , 今泉 明 , 村下 公一 , 三上 達也 , 玉田 嘉紀 , 鄭 松尹 , 中路 重之

人間ドック   37 ( 2 )   392 - 392   2022.8

弘前COI岩木健康増進プロジェクト健診でのアミノインデックス生活習慣病リスクスクリーニング結果と生活習慣因子の関連

矢野 由紀, 中村 英寛, 今泉 明, 村下 公一, 三上 達也, 玉田 嘉紀, 鄭 松尹, 中路 重之

人間ドック   37 ( 2 )   392 - 392   2022.8

岩木健康増進プロジェクトという単一フィールドでの多領域にわたる口腔内・腸内細菌研究

中路 重之 , 井元 清哉 , 玉田 嘉紀 , 岡本 哲平 , 大里 直樹 , 飯野 勢 , 佐藤 憲明 , 小林 恒 , 松原 篤 , 久田 貴義

Microbiome Science   1 ( 1 )   34 - 42   2022.7

【健康長寿にかかわる腸内細菌の役割に迫る】岩木健康増進プロジェクトという単一フィールドでの多領域にわたる口腔内・腸内細菌研究

中路 重之, 井元 清哉, 玉田 嘉紀, 岡本 哲平, 大里 直樹, 飯野 勢, 佐藤 憲明, 小林 恒, 松原 篤, 久田 貴義

Microbiome Science   1 ( 1 )   34 - 42   2022.7

多層オミックスと機械学習による軽度認知障害の予測モデルの構築

多田羅 洋太 , 中村 智洋 , 千葉 満 , 三枝 大輔 , 山嵜 博未 , 勝岡 史城 , 葛西 秋宅 , 川瀬 倫子 , 本間 リナ , 松田 りら , 藤本 哲太 , 荘司 美穂 , 元池 育子 , 玉田 嘉紀 , 橋爪 克仁 , 東海林 幹夫 , 木下 賢吾 , 伊東 健

日本認知症学会誌   35 ( 4 )   660 - 660   2021.10

多層オミックスと機械学習による軽度認知障害の予測モデルの構築

多田羅 洋太, 中村 智洋, 千葉 満, 三枝 大輔, 山嵜 博未, 勝岡 史城, 葛西 秋宅, 川瀬 倫子, 本間 リナ, 松田 りら, 藤本 哲太, 荘司 美穂, 元池 育子, 玉田 嘉紀, 橋爪 克仁, 東海林 幹夫, 木下 賢吾, 伊東 健

Dementia Japan   35 ( 4 )   660 - 660   2021.10

AIによる医療ビッグデータ解析

玉田 嘉紀

弘前市医師会報   56 ( 4 )   49 - 52   2021.8

電子カルテデータを用いた機械学習によるAKI発症予測モデルの構築と検証

内野詠一郎, 内野詠一郎, 佐藤憲明, 佐藤憲明, 櫻木実, 櫻木実, 玉田嘉紀, 山田博之, 山田博之, 柳田素子, 奥野恭史

日本集中治療医学会学術集会(Web)   48th ( Suppl.2 )   288 - 288   2021

胎児性肺癌における遺伝子ネットワーク解析

笠島 理加, 鈴木 理樹, 清水 英悟, 玉田 嘉紀, 新井田 厚司, 山口 類, 井元 清哉, 古川 洋一, 宮野 悟, 横瀬 智之, 宮城 洋平

日本癌学会総会記事   79回   PJ14 - 1   2020.10

Dynamic change of gene-to-gene regulatory networks in response to SARS-CoV-2 infection

Yoshihisa Tanaka, Kako Higashihara, Mai Adachi Nakazawa, Fumiyoshi Yamashita, Yoshinori Tamada, Yasushi Okuno

arXiv   2020.8

【AI、ICT】臨床データを用いた医療ビッグデータの解析と創薬への応用

内野 詠一郎, 佐藤 憲明, 小島 諒介, 玉田 嘉紀, 柳田 素子, 奥野 恭史

日本腎臓学会誌   62 ( 2 )   64 - 68   2020.3

AIと医療 データ主導型個別化医療と予測医療

奥野 恭史, 小清水 宏, 鎌田 真由美, 玉田 嘉紀, 小島 諒介, 内野 詠一郎

あいみっく   41 ( 1 )   2 - 5   2020.2

機械学習を利用した医療現場の退院時サマリ作成業務軽減に向けた試み

早川龍雄, 内野詠一郎, 玉田嘉紀, 奥野恭史

言語処理学会年次大会発表論文集(Web)   26th   2020

AI for Nephrology Using Electronic Medical Records

Eiichiro Uchino, Yoshinori Tamada, Yasushi Okuno

Proceedings for Annual Meeting of The Japanese Pharmacological Society   93 ( 0 )   2 - CS   2020

【AIとがん研究 その妥当性、有効性 ゲノム・エピゲノムから細胞・医用画像まで】分子レベルにおけるAIの創薬応用

田中 良尚, 小島 諒介, 玉田 嘉紀, 鎌田 真由美, 奥野 恭史

実験医学   37 ( 16 )   2702 - 2707   2019.10

【創薬とIT】標的分子探索、ドラッグリポジショニング、オミクスメカニズム解明

岩田 浩明, 小島 諒介, 玉田 嘉紀

細胞   51 ( 7 )   318 - 321   2019.6

【医療におけるAIの活用】医療×AI AIの基礎と医療への応用

玉田 嘉紀, 佐藤 憲明, 奥野 恭史

整形・災害外科   62 ( 3 )   215 - 221   2019.3

電子カルテ診療録に対する機械学習を用いた重要キーワード抽出機能の開発と今後の診療支援機能への展望

早川 龍雄, 井上 和仁, 玉田 嘉紀, 内野 詠一郎, 奥野 恭史

医療情報学連合大会論文集   38回   788 - 791   2018.11

x

75回   P - 2242   2016.10

Significant growth suppressive effects of TOPK and MELK inhibitors in kidney cancer

Taigo Kato, Hiroyuki Inoue, Seiya Imoto, Yoshinori Tamada, Takashi Miyamoto, Yo Matsuo, Yusuke Nakamura, Jae-Hyun Park

CANCER RESEARCH   76   2016.7

【ビッグデータ 変革する生命科学・医療 激増するオミクスデータ・医療データとどう向き合い、どう活用すべきか?】(第1章)ビッグデータと生命科学 「京」を使った大規模データ解析によるがんのシステム異常の網羅的解析

宮野 悟, 伊東 聰, Park Heewon, 白石 友一, 島村 徹平, 玉田 嘉紀, 井元 清哉

実験医学   34 ( 5 )   733 - 738   2016.3

肺腺癌におけるβカテニンの活性化はイレッサ(gefitinib)への耐性に寄与する

中田 飛鳥, 吉田 亮, 山口 類, 玉田 嘉紀, 藤田 アンドレ, 島村 徹平, 井元 清哉, 樋口 知之, 野村 将春, 木村 達郎, 軒原 浩, 東山 聖彦, 近藤 和也, 西原 広史, 東條 有伸, 矢野 聖二, 宮野 悟, 後藤 典子

日本生化学会大会・日本分子生物学会年会合同大会講演要旨集   88回・38回   [3P1117] - [3P1117]   2015.12

x

74回   J - 1175   2015.10

Elevated β-catenin pathway as a novel target for patients with resistance to EGF receptor targeting drugs

Nakata Asuka, Kimura Tatsuo, Nokihara Hiroshi, Higashiyama Masahiko, Kondoh Kazuya, Nishihara Hiroshi, Tojo Arinobu, Yano Seiji, Miyano Satoru, Gotoh Noriko, Yoshida Ryo, Yamaguchi Rui, Tamada Yoshinori, Fujita Andre, Shimamura Teppei, Imoto Seiya, Higuchi Tomoyuki, Nomura Masaharu

Japan Journal of Molecular Tumor Marker Research   31 ( 0 )   46 - 47   2015

Gene network analysis of paclitaxel-response in breast cancer patients

73回   P - 3394   2014.9

A systems biology approach towards better understanding of miRNA/mRNA regulatory networks in non-small cell lung cancer

71回   252 - 253   2012.8

Genomon: An analysis pipeline for somatic mutation detection from cancer exome sequencing data

71回   538 - 539   2012.8

Combined analysis of miRNA and mRNA expression towards better understanding of heterogeneities in lung adenocarcinoma

71回   254 - 254   2012.8

Optimization Techniques for Reducing Branch Divergence on GPUs

2012 ( 5 )   1 - 11   2012.5

2SD-04 Large scale gene network estimation with K computer(2SD Supercomputing in Molecular Network to Cellular Dynamics,Symposium,The 50th Annual Meeting of the Biophysical Society of Japan)

Tamada Yoshinori, Shimamura Teppei, Yamaguchi Rui, Niida Atsushi, Saito Ayumu, Kataoka Yuto, Imoto Seiya, Nagasaki Masao, Miyano Satoru

Seibutsu Butsuri   52 ( 0 )   S12   2012

動的ネットワーク構造探索の計算イニシアティブ バイオマーカー・分子標的探索のための動的ネットワークを予測する計算科学的方法の開発

井元 清哉, 山口 類, 島村 徹平, 玉田 嘉紀, 長崎 正朗, 斉藤 あゆむ, 植野 和子, 畑中 洋亮, 吉田 亮, 樋口 知之, 山内 麻衣, 後藤 典子, 宮野 悟

日本生化学会大会・日本分子生物学会年会合同大会講演要旨集   81回・31回   4S8 - 4   2008.11

DryadeによるGene Network DAGデータからの飽和頻出木マイニング

ターミエ アレックサンドル, 鷲尾 隆, 樋口 知之, 玉田 嘉紀, 井元 清哉, 大原 剛三, 元田 浩

人工知能学会全国大会論文集   6 ( 0 )   7 - 7   2006

共通配列探索手法とベイジアンネットワークによる遺伝子ネットワーク推定

玉田 嘉紀, 金 順暎, 坂内 英夫, 井元 清哉, 田代 康介, 久原 哲, 宮野 悟

日本統計学会講演報告集   71   145 - 146   2003.9

B-8 共通配列探索手法とベイジアンネットワークによる遺伝子ネットワーク推定(企画セッション:DNAアレイデータ解析に関する統計的諸問題)(2003年度統計関連学会連合大会記録(日本統計学会第71回大会))

玉田 嘉紀, 金 順暎, 坂内 英夫, 井元 清哉, 田代 康介, 久原 哲, 宮野 悟

日本統計学会誌   33 ( 3 )   393 - 393   2003

ゲノムデータからの知識発見の支援システム--ソフトウエアライブラリHypothesis Creator (ゲノムサイエンスの新たなる挑戦) -- (第3部 ゲノム情報科学)

坂内 英夫, 玉田 嘉紀, 丸山 修

蛋白質核酸酵素   46 ( 16 )   2555 - 2560   2001.12

A system for supporting knowledge discovery from genomic data: software library Hypothesis Creator

Bannai, H., Tamada, Y., Maruyama, O., Miyano, S.

Tanpakushitsu kakusan koso. Protein, nucleic acid, enzyme   46 ( 16 Suppl )   2001

データビューと仮説生成系のデザイン機能を有する発見支援システムHypothesisCreator (小特集 「発見科学」及び一般演題)

丸山 修, 玉田 嘉紀, 坂内 英夫

人工知能基礎論研究会   ( 41 )   129 - 132   2000.7